Description Usage Arguments Value
Cluster data in a flowFrame
using the flowClust
package. Given a fluorescence channel and, optionally, prior values for the on and off
peak locations, determines how many clusters there are and produces information on the populations.
1 2 | fluoroClust(fF, clust.type = "ICL", channel = "BL1-H",
crude.threshold = 3.5, do.plot = F)
|
fF |
a |
clust.type |
choose a clustering method; "ICL" or "crude". |
channel |
the fluorescence channel on which to cluster. |
crude.threshold |
the threshold to use if the "crude" method is chosen. |
do.plot |
a Boolean flag to determine whether to produce plots showing the trimming of each flowFrame. Defaults to |
a data.frame
containing num_samples
, the
number of samples clustered, max_clust_mean
, the mean value of fluoresence
in the "on" cluster, and max_clust_prop
, the proportion of the total
population that is "on".
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