add_resistance_info | Resistance Genotyping |
annotate_variants | Annotates variants |
call_resistance | CMV Resistance Genotyping from command line |
cmvdrg_data | Returns a dataframe of the cmvdrg database |
handle_fasta | Handles fasta files |
make_clin_table | Clinical information table |
plot_lollipop | Make gene lollipop plot |
read_input | Handles input file |
read_varscan_data | Handles varscan data |
runShinyCMV | Runs the CMV Resistance Phenotyping Shiny Application |
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