read_input: Handles input file
In ucl-pathgenomics/cmvdrg: Human CMV Drug Resistance Genotyping
Description
Usage
Arguments
Value
Description
This function handles vcf, varscan2 tab variant & fasta file formats
onto handle_fasta().
Returns an intermediate data.frame, which contains variant information to be
annotated by annotate_variants().
Usage
1
read_input(infile, global)
Arguments
infile
Path to the input file
global
Package object for consistent runtime variables
Value
An intermediate data.frame
ucl-pathgenomics/cmvdrg documentation built on Dec. 8, 2020, 2:36 a.m.
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Description Usage Arguments Value
Description
This function handles vcf, varscan2 tab variant & fasta file formats onto handle_fasta(). Returns an intermediate data.frame, which contains variant information to be annotated by annotate_variants().
Usage
1 | read_input(infile, global)
|
Arguments
infile |
Path to the input file |
global |
Package object for consistent runtime variables |
Value
An intermediate data.frame
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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