hmms_fromrules: microtraithmm_fromrules.
In ukaraoz/microtrait: microTrait
hmms_fromrules R Documentation
microtraithmm_fromrules.
Description
HMMs (Hidden Markov Models) underlying microTrait pipeline.
This data provides information on the database cross references for
each HMM and the performance of the HMM using KEGG orthologs as a
benchmark.
Usage
hmms_fromrules
Format
A data frame with 13 variables:
- microtraithmm-name
- microtraithmm-dbxref_kegg
- microtraithmm-dbxref_ec
- microtraithmm-dbxref_TC
- microtraithmm-description
- microtraithmm-notes
- score
- fscore
- tpr
- tnr
- fpr
- fnr
- accuracy
ukaraoz/microtrait documentation built on March 18, 2024, 5:47 p.m.
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| hmms_fromrules | R Documentation |
microtraithmm_fromrules.
Description
HMMs (Hidden Markov Models) underlying microTrait pipeline. This data provides information on the database cross references for each HMM and the performance of the HMM using KEGG orthologs as a benchmark.
Usage
hmms_fromrules
Format
A data frame with 13 variables:
- microtraithmm-name
- microtraithmm-dbxref_kegg
- microtraithmm-dbxref_ec
- microtraithmm-dbxref_TC
- microtraithmm-description
- microtraithmm-notes
- score
- fscore
- tpr
- tnr
- fpr
- fnr
- accuracy
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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