Files in umbibio/CIE-R-Package
Causal Inference and Directional Enrichment Methods on Biological Networks
.gitignore
DESCRIPTION
NAMESPACE
R/filterChIP.R
R/parseKBs.R
R/parseTRRUST.R
R/runCIE.R
R/runCIE.R~
R/runCytoscape.R
README.md
inst/dataPreProcessing/R/parseGAP.R
inst/dataPreProcessing/python/make_entrez_symbol_table.py
inst/dataPreProcessing/shell-scripts/ChIP-Atlas/antigens.txt
inst/dataPreProcessing/shell-scripts/ChIP-Atlas/command.txt
inst/dataPreProcessing/shell-scripts/downloadParseCommandLinesGAP.txt
inst/examples/analysisAsPerEmail.R
inst/examples/analysisAsPerEmail.R~
inst/examples/docuCode.R
inst/examples/runParseKBs.R
inst/images/GitHub-Mark-64px.png
inst/images/chip.ents.jpg
inst/images/chip.rels.jpg
inst/images/chip_tf.jpg
inst/images/dgeMYC.jpg
inst/images/downloadFiles.png
inst/images/entsTable.jpg
inst/images/graphs.jpg
inst/images/image
inst/images/legend.jpg
inst/images/pathStMYC.jpg
inst/images/pathTcMYC.jpg
inst/images/pathTrMYC.jpg
inst/images/processDEGs.table.jpg
inst/images/relsTable.jpg
inst/images/stringMYC.jpg
inst/images/tissChIPmyc.jpg
inst/images/trrustMYC.jpg
man/createCytoGraph.Rd
man/filterChIPAtlas.Rd
man/parseChIP.Rd
man/parseStringKB.Rd
man/parseTRED.Rd
man/parseTRRUST.Rd
man/pathwayEnrichment.Rd
man/runCIE.Rd
