vbaliga/pathviewR
Wrangle, Analyze, and Visualize Animal Movement Data

Package index
Search the vbaliga/pathviewR package
Vignettes
Functions
95
Source code
50
Man pages
49
Home
/
GitHub
/
vbaliga/pathviewR: Wrangle, Analyze, and Visualize Animal Movement Data
/
Files

Files in vbaliga/pathviewR
Wrangle, Analyze, and Visualize Animal Movement Data

.Rbuildignore
.github/.gitignore
.github/CONTRIBUTING.md .github/ISSUE_TEMPLATE/bug-fix-request.md .github/ISSUE_TEMPLATE/feature-request--import-function-for-file-type.md .github/ISSUE_TEMPLATE/general-feature-request.md .github/pull_request_template.md
.github/workflows/R-CMD-check.yaml
.github/workflows/test-coverage.yaml
.gitignore
CITATION.cff
CRAN-SUBMISSION
DESCRIPTION
LICENSE.md
NAMESPACE
NEWS.md R/all_in_one_functions.R R/analytical_functions.R R/batch_functions.R R/data_import_functions.R R/globals.R R/pathviewR.R R/plotting_functions.R R/utility_functions.R R/utils-pipe.R README.Rmd README.md
_pkgdown.yml
codecov.yml
codemeta.json
cran-comments.md
docs/404.html
docs/CONTRIBUTING.html
docs/LICENSE.html
docs/apple-touch-icon-120x120.png
docs/apple-touch-icon-152x152.png
docs/apple-touch-icon-180x180.png
docs/apple-touch-icon-60x60.png
docs/apple-touch-icon-76x76.png
docs/apple-touch-icon.png
docs/articles/data-import-cleaning.html
docs/articles/data-import-cleaning_files/figure-html/all-in-one-1.png
docs/articles/data-import-cleaning_files/figure-html/get_full_examples-1.png
docs/articles/data-import-cleaning_files/figure-html/get_full_examples-2.png
docs/articles/data-import-cleaning_files/figure-html/redefine_example_plots-1.png
docs/articles/data-import-cleaning_files/figure-html/redefine_example_plots-2.png
docs/articles/data-import-cleaning_files/figure-html/rotate_example_plots-1.png
docs/articles/data-import-cleaning_files/figure-html/rotate_example_plots-2.png
docs/articles/data-import-cleaning_files/figure-html/select_x_examples-1.png
docs/articles/data-import-cleaning_files/figure-html/select_x_examples-2.png
docs/articles/index.html
docs/articles/managing-frame-gaps.html
docs/articles/managing-frame-gaps_files/figure-html/cleanup_data-1.png
docs/articles/managing-frame-gaps_files/figure-html/get_full_trajectories-1.png
docs/articles/managing-frame-gaps_files/figure-html/get_full_trajectories-2.png
docs/articles/managing-frame-gaps_files/figure-html/max_frame_gap_1-1.png
docs/articles/managing-frame-gaps_files/figure-html/max_frame_gap_5-1.png
docs/articles/managing-frame-gaps_files/figure-html/max_frame_gap_auto-1.png
docs/articles/managing-frame-gaps_files/figure-html/max_frame_gap_auto-2.png
docs/articles/managing-frame-gaps_files/figure-html/max_frame_gap_auto-3.png
docs/articles/managing-frame-gaps_files/figure-html/visualize_frame_gap_choice-1.png
docs/articles/visual-perception-functions.html
docs/articles/visual-perception-functions_files/figure-html/flydra_min_dist_end-1.png
docs/articles/visual-perception-functions_files/figure-html/flydra_sf_end-1.png
docs/articles/visual-perception-functions_files/figure-html/flydra_vis_angle_end-1.png
docs/articles/visual-perception-functions_files/figure-html/motive_min_dist_pos-1.png
docs/articles/visual-perception-functions_files/figure-html/motive_sf_pos-1.png
docs/articles/visual-perception-functions_files/figure-html/motive_vis_angle_pos-1.png
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/favicon-16x16.png
docs/favicon-32x32.png
docs/favicon.ico
docs/index.html
docs/link.svg
docs/logo.png
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/pull_request_template.html
docs/reference/Rplot001.png
docs/reference/Rplot002.png
docs/reference/Rplot003.png
docs/reference/Rplot004.png
docs/reference/Rplot005.png
docs/reference/Rplot006.png
docs/reference/Rplot007.png
docs/reference/Rplot008.png
docs/reference/Rplot009.png
docs/reference/Rplot010.png
docs/reference/Rplot011.png
docs/reference/as_viewr.html
docs/reference/bind_viewr_objects.html
docs/reference/calc_min_dist_box.html
docs/reference/calc_min_dist_v.html
docs/reference/clean_by_span.html
docs/reference/clean_viewr.html
docs/reference/clean_viewr_batch.html
docs/reference/deg_2_rad.html
docs/reference/exclude_by_velocity-1.png
docs/reference/exclude_by_velocity-2.png
docs/reference/exclude_by_velocity.html
docs/reference/figures/README-all-in-one-1.png
docs/reference/figures/README-all_in_one-1.png
docs/reference/figures/README-motive_V_sf_pos-1.png
docs/reference/figures/README-pressure-1.png
docs/reference/figures/logo.png
docs/reference/fill_traj_gaps-1.png
docs/reference/fill_traj_gaps-2.png
docs/reference/fill_traj_gaps.html
docs/reference/find_curve_elbow-1.png
docs/reference/find_curve_elbow-2.png
docs/reference/find_curve_elbow.html
docs/reference/gather_tunnel_data.html
docs/reference/get_2d_angle.html
docs/reference/get_3d_angle.html
docs/reference/get_3d_cross_prod.html
docs/reference/get_dist_point_line.html
docs/reference/get_full_trajectories.html
docs/reference/get_header_viewr.html
docs/reference/get_sf.html
docs/reference/get_traj_velocities.html
docs/reference/get_velocity.html
docs/reference/get_vis_angle.html
docs/reference/import_and_clean_batch.html
docs/reference/import_and_clean_viewr.html
docs/reference/import_batch.html
docs/reference/index.html
docs/reference/insert_treatments.html
docs/reference/pathviewR-package.html
docs/reference/pipe.html
docs/reference/plot_by_subject.html
docs/reference/plot_viewr_trajectories-1.png
docs/reference/plot_viewr_trajectories-10.png
docs/reference/plot_viewr_trajectories-11.png
docs/reference/plot_viewr_trajectories-2.png
docs/reference/plot_viewr_trajectories-3.png
docs/reference/plot_viewr_trajectories-4.png
docs/reference/plot_viewr_trajectories-5.png
docs/reference/plot_viewr_trajectories-6.png
docs/reference/plot_viewr_trajectories-7.png
docs/reference/plot_viewr_trajectories-8.png
docs/reference/plot_viewr_trajectories-9.png
docs/reference/plot_viewr_trajectories.html
docs/reference/quick_separate_trajectories.html
docs/reference/rad_2_deg.html
docs/reference/read_flydra_mat.html
docs/reference/read_motive_csv.html
docs/reference/redefine_tunnel_center.html
docs/reference/relabel_viewr_axes.html
docs/reference/remove_duplicate_frames.html
docs/reference/remove_vel_anomalies.html
docs/reference/rename_viewr_characters.html
docs/reference/rescale_tunnel_data.html
docs/reference/rm_by_trajnum.html
docs/reference/rotate_tunnel.html
docs/reference/section_tunnel_by-1.png
docs/reference/section_tunnel_by.html
docs/reference/select_x_percent.html
docs/reference/separate_trajectories.html
docs/reference/set_traj_frametime.html
docs/reference/standardize_tunnel.html
docs/reference/trim_tunnel_outliers.html
docs/reference/visualize_frame_gap_choice-1.png
docs/reference/visualize_frame_gap_choice.html
docs/sitemap.xml
example_scripts/calc_s_freq.R example_scripts/calc_s_freq_pancake.R example_scripts/calc_vis_angle.R example_scripts/example_calc_s_freq.R example_scripts/example_rectangular_tunnel.R example_scripts/gap_filling_idea.R example_scripts/insert_treatments_pancake.R example_scripts/pathviewR_pancakes.R
example_scripts/projectile_vel_test.csv
example_scripts/ropensci_reviews_checklist.html
example_scripts/ropensci_reviews_checklist.md example_scripts/vis_percept_reviews.R
example_scripts/visual_pattern_cycles.jpeg
images/pathviewrhex.pdf
images/pathviewrhex_300dpi_trns.png
images/pathviewrhex_300dpi_trns_150p.png
images/pathviewrhex_300dpi_white.png
images/pathviewrhex_600dpi_trns.png
images/pathviewrhex_600dpi_white.png
images/stim_param.jpeg
images/stim_param_angle.jpeg
inst/CITATION
inst/extdata/pathviewr_flydra_example_data.mat
inst/extdata/pathviewr_motive_example_data.csv
man/as_viewr.Rd man/bind_viewr_objects.Rd man/calc_min_dist_box.Rd man/calc_min_dist_v.Rd man/clean_by_span.Rd man/clean_viewr.Rd man/clean_viewr_batch.Rd man/deg_2_rad.Rd man/exclude_by_velocity.Rd
man/figures/README-all-in-one-1.png
man/figures/README-all_in_one-1.png
man/figures/README-motive_V_sf_pos-1.png
man/figures/README-pressure-1.png
man/figures/logo.png
man/fill_traj_gaps.Rd man/find_curve_elbow.Rd man/gather_tunnel_data.Rd man/get_2d_angle.Rd man/get_3d_angle.Rd man/get_3d_cross_prod.Rd man/get_dist_point_line.Rd man/get_full_trajectories.Rd man/get_header_viewr.Rd man/get_sf.Rd man/get_traj_velocities.Rd man/get_velocity.Rd man/get_vis_angle.Rd man/import_and_clean_batch.Rd man/import_and_clean_viewr.Rd man/import_batch.Rd man/insert_treatments.Rd man/pathviewr-package.Rd man/pipe.Rd man/plot_by_subject.Rd man/plot_viewr_trajectories.Rd man/quick_separate_trajectories.Rd man/rad_2_deg.Rd man/read_flydra_mat.Rd man/read_motive_csv.Rd man/redefine_tunnel_center.Rd man/relabel_viewr_axes.Rd man/remove_duplicate_frames.Rd man/remove_vel_anomalies.Rd man/rename_viewr_characters.Rd man/rescale_tunnel_data.Rd man/rm_by_trajnum.Rd man/rotate_tunnel.Rd man/section_tunnel_by.Rd man/select_x_percent.Rd man/separate_trajectories.Rd man/set_traj_frametime.Rd man/standardize_tunnel.Rd man/trim_tunnel_outliers.Rd man/visualize_frame_gap_choice.Rd
pathviewR.Rproj
pkgdown/favicon/apple-touch-icon-120x120.png
pkgdown/favicon/apple-touch-icon-152x152.png
pkgdown/favicon/apple-touch-icon-180x180.png
pkgdown/favicon/apple-touch-icon-60x60.png
pkgdown/favicon/apple-touch-icon-76x76.png
pkgdown/favicon/apple-touch-icon.png
pkgdown/favicon/favicon-16x16.png
pkgdown/favicon/favicon-32x32.png
pkgdown/favicon/favicon.ico
tests/testthat.R tests/testthat/test-angular_functions.R tests/testthat/test-as_viewr.R tests/testthat/test-calc_min_dist_box.R tests/testthat/test-calc_min_dist_v.R tests/testthat/test-clean_viewr.R tests/testthat/test-dist_pointline_and_curve_elbow.R tests/testthat/test-exclude_by_velocity.R tests/testthat/test-flydra_data_import.R tests/testthat/test-gather_tunnel_data.R tests/testthat/test-get_3d_cross_prod.R tests/testthat/test-get_header.R tests/testthat/test-get_sf.R tests/testthat/test-get_velocity.R tests/testthat/test-get_vis_angle.R tests/testthat/test-import_and_clean_batch.R tests/testthat/test-insert_treatments.R tests/testthat/test-plot_by_subject.R tests/testthat/test-plot_viewr_trajectories.R tests/testthat/test-rad_deg_conversions.R tests/testthat/test-read_motive_csv.R tests/testthat/test-redefine_tunnel_center.R tests/testthat/test-relabel_viewr_axes.R tests/testthat/test-rename_viewr_characters.R tests/testthat/test-rescale_tunnel_data.R tests/testthat/test-rm_by_trajnum.R tests/testthat/test-rotate_tunnel.R tests/testthat/test-section_tunnel_by.R tests/testthat/test-standardize_tunnel.R tests/testthat/test-standarize_tunnel.R tests/testthat/test-trim_tunnel_outliers.R tests/testthat/test-visualize_frame_gap.R
vignettes/.gitignore
vignettes/data-import-cleaning.Rmd vignettes/managing-frame-gaps.Rmd vignettes/visual-perception-functions.Rmd
vbaliga/pathviewR documentation built on March 16, 2023, 4:13 p.m.

R Package Documentation

rdrr.io home R language documentation Run R code online

Browse R Packages

CRAN packages Bioconductor packages R-Forge packages GitHub packages

We want your feedback!

Note that we can't provide technical support on individual packages. You should contact the package authors for that.
GitHub issue tracker
ian@mutexlabs.com
Personal blog

 
Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.

Close