Files in vegarsti/fhtboost

Boosting for High-Dimensional First Hitting Time Threshold Regression

R/FHT_componentwise_loss_function_derivative_mu.R R/FHT_componentwise_loss_function_derivative_y0.R R/FHT_componentwise_minus_loglikelihood_with_parameters.R R/FHT_hazard.R R/FHT_link_function.R R/FHT_loglikelihood_with_data.R R/FHT_loglikelihood_with_y0_mu.R R/FHT_minus_loglikelihood_with_all_parameters.R R/FHT_only_intercepts.R R/FHT_parametric_cumulative_hazard.R R/FHT_parametric_density.R R/FHT_parametric_survival.R R/FHT_prob_infinity.R R/best_least_squares_update.R R/boosting_iteration_both.R R/boosting_iteration_mu.R R/boosting_iteration_y0.R R/boosting_run.R R/brier_r2.R R/brier_r2_with_censoring_on_times.R R/brier_score_no_censoring.R R/brier_score_on_censored_data.R R/brier_score_on_uncensored_data.R R/brier_score_with_censoring.R R/brier_score_with_censoring_on_times.R R/brier_score_with_censoring_on_times_with_probabilities.R R/calculate_at_risk.R R/censor_observations.R R/create_folds.R R/create_folds_stratified.R R/cyclic_boosting_run.R R/data_to_FHT_loss_function.R R/data_to_optimizable_function.R R/destandardize.R R/draw_IG_data.R R/estimate_baseline_hazard.R R/estimate_model_and_validate_and_write_to_file.R R/generate_clinical.R R/get_all_but_kth_fold.R R/get_kth_fold.R R/kaplan_meier.R R/kaplan_meier_estimate_of_censoring.R R/kaplan_meier_plot.R R/loss_function_derivative_mu.R R/loss_function_derivative_y0.R R/make_filename.R R/maximum_likelihood_intercepts.R R/non_null_parameters.R R/non_parametric_estimates.R R/parameter_vector_to_list.R R/plot_CV.R R/plot_IG_times.R R/plot_wiener_processes.R R/run_CV.R R/run_CV_and_write_to_file.R R/run_CV_clinical.R R/run_CV_cyclic.R R/run_CV_cyclic_helper_mu.R R/run_CV_cyclic_helper_y0.R R/run_CV_genetic.R R/run_L2Boost.R R/run_optimization_on_simulated_data.R R/simulate_FHT_data.R R/simulate_normal_data.R R/survival_censored.R README.md blah.R create_example_plots_for_application_chapter.R dataset_running.R man/FHT_link_function.Rd man/FHT_loglikelihood_with_data.Rd man/calculate_at_risk.Rd man/censor_observations.Rd man/data_to_FHT_loss_function.Rd man/data_to_optimizable_function.Rd man/kaplan_meier.Rd man/loss_function_derivative_mu.Rd man/loss_function_derivative_y0.Rd man/non_parametric_estimates.Rd man/parameter_vector_to_list.Rd man/run_optimization_on_simulated_data.Rd man/simulate_FHT_data.Rd oberthur_remote.R readMarisaData.R readOberthuerAl.R reproducible_runs.R run_boosting.R run_oberthuer_remote.R run_on_other_computer.R run_on_this_computer.R run_small_example.R summarize_correlated_dataset.R summarize_dataset.R summarize_oberthur.R