.Rbuildignore
.github/ISSUE_TEMPLATE/bug_report.md
.github/ISSUE_TEMPLATE/feature_request.md
.github/workflows/Mac-Dev-Dev.yml
.github/workflows/Mac-Dev-Mas.yml
.github/workflows/Mac-Mas-Mas.yml
.github/workflows/Multi-CI-Dev-Dev.yml
.github/workflows/Multi-CI-Dev-Mas.yml
.github/workflows/Multi-CI-Mas-Mas.yml
.github/workflows/Ubu-Dev-Dev.yml
.github/workflows/Ubu-Dev-Mas.yml
.github/workflows/Ubu-Mas-Mas.yml
.github/workflows/Win-Dev-Dev.yml
.github/workflows/Win-Dev-Mas.yml
.github/workflows/Win-Mas-Mas.yml
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
PULL_REQUEST_TEMPLATE.md
R/bdclean.R
R/clean_data.R
R/decision_making.R
R/generate_report.R
R/quality_checks.R
R/questionnaire.R
R/reference_classes.R
R/run_bdclean.R
README.md
img/R_icon.png
img/bdclean2.png
inst/rmd/generateDetailedReport.Rmd
inst/rmd/generateShortReport.Rmd
inst/scripts/bddwc.R
inst/shiny/bdclean/global.R
inst/shiny/bdclean/modules/customized-checks-module.R
inst/shiny/bdclean/modules/domain-cleaning-module.R
inst/shiny/bdclean/modules/flagging-module.R
inst/shiny/bdclean/modules/questionnaire-module.R
inst/shiny/bdclean/server.R
inst/shiny/bdclean/tests/integration-01-uploaded.data-questionnaire-test-expected/001.json
inst/shiny/bdclean/tests/integration-01-uploaded.data-questionnaire-test-expected/001.png
inst/shiny/bdclean/tests/integration-01-uploaded.data-questionnaire-test-expected/002.json
inst/shiny/bdclean/tests/integration-01-uploaded.data-questionnaire-test-expected/002.png
inst/shiny/bdclean/tests/integration-01-uploaded.data-questionnaire-test-expected/003.json
inst/shiny/bdclean/tests/integration-01-uploaded.data-questionnaire-test-expected/003.png
inst/shiny/bdclean/tests/integration-01-uploaded.data-questionnaire-test-expected/004.json
inst/shiny/bdclean/tests/integration-01-uploaded.data-questionnaire-test-expected/004.png
inst/shiny/bdclean/tests/integration-01-uploaded.data-questionnaire-test-expected/005.json
inst/shiny/bdclean/tests/integration-01-uploaded.data-questionnaire-test-expected/005.png
inst/shiny/bdclean/tests/integration-01-uploaded.data-questionnaire-test-expected/006.json
inst/shiny/bdclean/tests/integration-01-uploaded.data-questionnaire-test-expected/006.png
inst/shiny/bdclean/tests/integration-01-uploaded.data-questionnaire-test-expected/007.json
inst/shiny/bdclean/tests/integration-01-uploaded.data-questionnaire-test-expected/007.png
inst/shiny/bdclean/tests/integration-01-uploaded.data-questionnaire-test-expected/008.json
inst/shiny/bdclean/tests/integration-01-uploaded.data-questionnaire-test-expected/008.png
inst/shiny/bdclean/tests/integration-01-uploaded.data-questionnaire-test.R
inst/shiny/bdclean/tests/integration-02-uploaded.data-custom.checks-test-expected/001.json
inst/shiny/bdclean/tests/integration-02-uploaded.data-custom.checks-test-expected/001.png
inst/shiny/bdclean/tests/integration-02-uploaded.data-custom.checks-test-expected/002.json
inst/shiny/bdclean/tests/integration-02-uploaded.data-custom.checks-test-expected/002.png
inst/shiny/bdclean/tests/integration-02-uploaded.data-custom.checks-test-expected/003.json
inst/shiny/bdclean/tests/integration-02-uploaded.data-custom.checks-test-expected/003.png
inst/shiny/bdclean/tests/integration-02-uploaded.data-custom.checks-test-expected/004.json
inst/shiny/bdclean/tests/integration-02-uploaded.data-custom.checks-test-expected/004.png
inst/shiny/bdclean/tests/integration-02-uploaded.data-custom.checks-test-expected/005.json
inst/shiny/bdclean/tests/integration-02-uploaded.data-custom.checks-test-expected/005.png
inst/shiny/bdclean/tests/integration-02-uploaded.data-custom.checks-test.R
inst/shiny/bdclean/tests/integration-03-missing.data.as.fails-test-expected/001.json
inst/shiny/bdclean/tests/integration-03-missing.data.as.fails-test-expected/001.png
inst/shiny/bdclean/tests/integration-03-missing.data.as.fails-test-expected/002.json
inst/shiny/bdclean/tests/integration-03-missing.data.as.fails-test-expected/002.png
inst/shiny/bdclean/tests/integration-03-missing.data.as.fails-test-expected/003.json
inst/shiny/bdclean/tests/integration-03-missing.data.as.fails-test-expected/003.png
inst/shiny/bdclean/tests/integration-03-missing.data.as.fails-test-expected/004.json
inst/shiny/bdclean/tests/integration-03-missing.data.as.fails-test-expected/004.png
inst/shiny/bdclean/tests/integration-03-missing.data.as.fails-test-expected/005.json
inst/shiny/bdclean/tests/integration-03-missing.data.as.fails-test-expected/005.png
inst/shiny/bdclean/tests/integration-03-missing.data.as.fails-test.R
inst/shiny/bdclean/tests/module-02-configure-cleaning-test-expected/001.json
inst/shiny/bdclean/tests/module-02-configure-cleaning-test-expected/001.png
inst/shiny/bdclean/tests/module-02-configure-cleaning-test-expected/002.json
inst/shiny/bdclean/tests/module-02-configure-cleaning-test-expected/002.png
inst/shiny/bdclean/tests/module-02-configure-cleaning-test-expected/003.json
inst/shiny/bdclean/tests/module-02-configure-cleaning-test-expected/003.png
inst/shiny/bdclean/tests/module-02-configure-cleaning-test-expected/004.json
inst/shiny/bdclean/tests/module-02-configure-cleaning-test-expected/004.png
inst/shiny/bdclean/tests/module-02-configure-cleaning-test-expected/005.json
inst/shiny/bdclean/tests/module-02-configure-cleaning-test-expected/005.png
inst/shiny/bdclean/tests/module-02-configure-cleaning-test.R
inst/shiny/bdclean/tests/module-03-flagging-test-expected/001.json
inst/shiny/bdclean/tests/module-03-flagging-test-expected/001.png
inst/shiny/bdclean/tests/module-03-flagging-test-expected/002.json
inst/shiny/bdclean/tests/module-03-flagging-test-expected/002.png
inst/shiny/bdclean/tests/module-03-flagging-test-expected/003.json
inst/shiny/bdclean/tests/module-03-flagging-test-expected/003.png
inst/shiny/bdclean/tests/module-03-flagging-test-expected/004.json
inst/shiny/bdclean/tests/module-03-flagging-test-expected/004.png
inst/shiny/bdclean/tests/module-03-flagging-test.R
inst/shiny/bdclean/tests/module-04-artifacts-test-expected/001.json
inst/shiny/bdclean/tests/module-04-artifacts-test-expected/001.png
inst/shiny/bdclean/tests/module-04-artifacts-test-expected/002.download
inst/shiny/bdclean/tests/module-04-artifacts-test-expected/003.json
inst/shiny/bdclean/tests/module-04-artifacts-test-expected/003.png
inst/shiny/bdclean/tests/module-04-artifacts-test-expected/004.download
inst/shiny/bdclean/tests/module-04-artifacts-test-expected/005.json
inst/shiny/bdclean/tests/module-04-artifacts-test-expected/005.png
inst/shiny/bdclean/tests/module-04-artifacts-test-expected/006.download
inst/shiny/bdclean/tests/module-04-artifacts-test-expected/007.json
inst/shiny/bdclean/tests/module-04-artifacts-test-expected/007.png
inst/shiny/bdclean/tests/module-04-artifacts-test-expected/008.json
inst/shiny/bdclean/tests/module-04-artifacts-test-expected/008.png
inst/shiny/bdclean/tests/module-04-artifacts-test.R
inst/shiny/bdclean/tests/puma_concolor.csv
inst/shiny/bdclean/ui.R
inst/shiny/bdclean/www/bdclean_favicon_3.png
inst/shiny/bdclean/www/bdverse.css
inst/shiny/bdclean/www/bdverse.png
inst/shiny/bdclean/www/bdverse.scss
inst/shiny/bdclean/www/bdverse_0.1.png
inst/shiny/bdclean/www/checkbox.css
inst/shiny/bdclean/www/completed.png
inst/shiny/bdclean/www/style.css
inst/testdata/mammals-flag.csv
inst/testdata/mammals.csv
inst/testdata/questionnaire-response.rds
man/BdQuestion-class.Rd
man/BdQuestionContainer-class.Rd
man/bdclean.Rd
man/bdclean_app.Rd
man/clean_data.Rd
man/cleaning_function.Rd
man/create_alternate_questionnaire_1.Rd
man/create_default_questionnaire.Rd
man/create_report_data.Rd
man/earliest_date.Rd
man/get_checks_list.Rd
man/get_user_response.Rd
man/perform_Cleaning.Rd
man/run_questionnaire.Rd
man/spatial_resolution.Rd
man/taxo_level.Rd
man/temporal_resolution.Rd
tests/testthat.R
tests/testthat/helper_data.R
tests/testthat/test-console.R
tic-dev.R
tic.R