abacusPlot: Plot daily detections over time (or across recievers)

In vinayudyawer/ATT: The Animal Tracking Toolbox: an extention to the VTrack package

Description

Produces an abacus plot to visualise patterns of detection over time or across signal receivers

Usage

abacusPlot(ATTdata, id = NULL, theme = "theme_linedraw", xlab = NULL,
  ylab = NULL, det.col = 2, tag.col = 8, facet = FALSE,
  new.window = TRUE, ...)

Arguments

ATTdata	input 'ATT' object containing tag detection, metadata and station information.
id	input Tag.ID for a single or several tags within the 'ATT' object to plot
theme	ggplot theme used in plot (default = "theme_linedraw")
xlab	x axis label
ylab	y axis label
det.col	color of points indicating detections (default = "red")
tag.col	color of points indicating start and end of tag life (default = "grey")
facet	conditional argument to plot faceted plot, plotting detections by each animal on receiver stations (default = FALSE)
new.window	conditional argument for plotting in a new window (default = TRUE)
...	other arguments sent to geom_points to modify plotting aesthetics

Value

Produces an abacus plot in a new window. Daily detections over time for each tag (determined by "Tag.ID" field name). If facet parameter is TRUE detections of each tag on receiver stations plotted.

See Also

Input data needs to be setup using setupData

Examples

## Import example datasets
data(IMOSdata)
data(taginfo)
data(statinfo)

## Setup data
ATTdata<- setupData(Tag.Detections = IMOSdata, Tag.Metadata = taginfo, Station.Information = statinfo, source="IMOS")

## Create abacus plot
abacusPlot(ATTdata)

vinayudyawer/ATT documentation built on Oct. 8, 2020, 3:48 p.m.