gsea_olink_viz | R Documentation |
Create several visualizations starting from a cluterProfiler result object
gsea_olink_viz(gsea_res, saveFolder, nterms = 10, contrastName = compname)
gsea_res |
clusterProfiler result object |
saveFolder |
path to folder where results are to be saved |
nterms |
Number of terms to be visuzlized for several visualizations, Default: 10 |
contrastName |
Name of contrast for filename purposes , Default: compname |
DETAILS
Several visualizations are saved to disk in the folder provided
c("dotplot,compareClusterResult-method", "dotplot", "dotplot")
,c("pairwise_termsim", "pairwise_termsim")
,c("emapplot", "emapplot")
,c("gseaplot2", "gseaplot2")
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## Not run: if(interactive()){ #EXAMPLE1 } ## End(Not run)
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