gsea_olink_viz: gsea_olink_viz

View source: R/utils.r

gsea_olink_vizR Documentation

gsea_olink_viz

Description

Create several visualizations starting from a cluterProfiler result object

Usage

gsea_olink_viz(gsea_res, saveFolder, nterms = 10, contrastName = compname)

Arguments

gsea_res

clusterProfiler result object

saveFolder

path to folder where results are to be saved

nterms

Number of terms to be visuzlized for several visualizations, Default: 10

contrastName

Name of contrast for filename purposes , Default: compname

Details

DETAILS

Value

Several visualizations are saved to disk in the folder provided

See Also

c("dotplot,compareClusterResult-method", "dotplot", "dotplot"),c("pairwise_termsim", "pairwise_termsim"),c("emapplot", "emapplot"),c("gseaplot2", "gseaplot2") arrow

Examples

## Not run: 
if(interactive()){
 #EXAMPLE1
 }

## End(Not run)

vincent-van-hoef/Analysis5204 documentation built on June 24, 2022, 2:41 p.m.