getMatrixWithSelectedIds: Convert the rownames of a dataframe or matrix to a different...

In vincent-van-hoef/myFunctions: Collection of custom R functions

Description

This function can take any of the columns(org.Hs.eg.db) as type and keys as long as the row names are in the format of the keys argument

Usage

getMatrixWithSelectedIds(df, type, keys, db)

Arguments

df	Dataframe of matrix whose rownames are to be converted.
type	Format of converted rownames: e.g. "SYMBOL" or "ENTREZID"
keys	Present format of rownames: e.g. "SYMBOL" or "ENTREZID"
db	Annotation database: e.g. "org.Hs.eg.db" or "org.Mm.eg.db"

Examples

M1entrez <- getMatrixWithSelectedIds(M1symb, type="ENTREZID", keys="SYMBOL", db = org.Mm.eg.db)

vincent-van-hoef/myFunctions documentation built on May 14, 2019, 10:36 p.m.