Man pages for vincenzoaellis/malaviR
An R interface to MalAvi

blast_malaviBLAST MalAvi
clean_alignmentIdentify and remove repeated haplotypes from a (MalAvi)...
clean_namesModify lineage names in sequence alignments to match the rest...
extract_alignmentDownload MalAvi Sequence Alignments
extract_tableDownload MalAvi Tables
malavi_versionAccess current MalAvi version number
sister_taxaIdentify sister taxa in a phylogeny
taxonomyHost taxonomy in the MalAvi dataset
vincenzoaellis/malaviR documentation built on April 18, 2018, 2:13 p.m.