Description Usage Arguments Details Value Author(s) References Examples
View source: R/extract_table2.r
This function downloads the nine available MalAvi data tables.
1 | extract_table(table = "Hosts and Sites Table")
|
table |
One of nine table names in quotes or |
The nine MalAvi tables are:
"Hosts and Sites Table"
"Table of References"
"Grand Lineage Summary"
"Parasite Summary Per Host"
"Table of Lineage Names"
"Morpho Species Summary"
"Vector Data Table"
"Other Genes Table"
"Database Summary Report"
Alternatively, "all"
will download all of the tables into a single list.
Each table will be in the form of an object of class data.frame
; however "all"
will result in a list
with each table as an element.
Vincenzo A. Ellis vincenzoaellis@gmail.com
Bensch S, Hellgren O, and Perez-Tris J. 2009. MalAvi: a public database of malaria parasites and related haemosporidians in avian hosts based on mitochondrial cytochrome b lineages. Molecular Ecology Resources 9: 1353-1358. http://mbio-serv2.mbioekol.lu.se/Malavi/
1 2 3 | ## download the "Table of References"
refs <- extract_table("Table of References")
head(refs) # take a look
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