sracipeCircuit: Method to get the circuit

Description Usage Arguments Value Examples

Description

The circuit file should contain three columns with headers, "Source" "Target" "Type" Here "Source" and "Target" are the names of the genes and "Type" refers to the regulation, "1" if source activates target and "2" if source inhibits target.

Usage

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sracipeCircuit(.object)

## S4 method for signature 'RacipeSE'
sracipeCircuit(.object)

Arguments

.object

RacipeSE object

Value

A dataframe

Examples

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rs <- RacipeSE()
data("demoCircuit")
sracipeCircuit(rs) <- demoCircuit
circuitDataFrame <- sracipeCircuit(rs)
rm(rs, demoCircuit,circuitDataFrame)

vivekkohar/test documentation built on March 23, 2021, 5:35 a.m.