Description Usage Arguments Examples
produce a TnT::LineTrack with coverage information for a selected gene+radius
1 | linetrack_covg_by_symbol(sym, bamf, radius = 0, ...)
|
sym |
a gene symbol |
bamf |
a path to indexed BAM file |
radius |
numeric(1) defaulting to zero, upstream/downstream extra reach |
... |
passed to LineTrack, so can include color, etc. |
1 2 3 4 | if (requireNamespace("RNAseqData.HNRNPC.bam.chr14")) {
f1 = RNAseqData.HNRNPC.bam.chr14::RNAseqData.HNRNPC.bam.chr14_BAMFILES[1]
linetrack_covg_by_symbol("HNRNPC", f1, color="gray")
}
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.