addPIMM: add the 'percent immature mRNA' estimates to a...

Description Usage Arguments Value

View source: R/getPIMM.R

Description

add the 'percent immature mRNA' estimates to a SingleCellExperiment

Usage

1
addPIMM(exsce, intsce)

Arguments

exsce

SingleCellExperiment with exon counts

intsce

SingleCellExperiment with intron counts

Value

SingleCellExperiment exsce with an additional colData column PIMM with the average value over all genes for each cell of the quantity (intronCount/(intronCount+exonCount))


vjcitn/pcmp documentation built on May 25, 2019, 2:21 p.m.