plotSelMap: plot selection map from output of pcmpApp

Description Usage Arguments

View source: R/infra.R

Description

plot selection map from output of pcmpApp

Usage

1
plotSelMap(esce, proj, dim1 = 1, dim2 = 2, alpha = 0.5)

Arguments

esce

an extended SingleCellExperiment, with metadata extended using pcmpApp

proj

character(1) name of a reducedDims component of esce

dim1

numeric(1) dimension to use as x axis

dim2

numeric(1) dimension to use as y axis

alpha

numeric(1) defaults to .5 for transparency used in geom_point


vjcitn/pcmp documentation built on May 25, 2019, 2:21 p.m.