best_PTM_location_by_ascore: Remap Sequence IDs in FASTA File
In vladpetyuk/PlexedPiper: Pipeline for isobaric quantification.
Description
Usage
Arguments
Value
Examples
Description
The function remaps the IDs in the FASTA file from RefSeq to Gene symbols.
In case of multiple RefSeq sequences available, only the first longest is
retained.
Usage
1
best_PTM_location_by_ascore(msnid, ascore)
Arguments
msnid
(MSnID object) MS/MS ID data
ascore
(data.frame) AScore results
Value
(MSnID object) MS/MS ID data with added AScore
Examples
1
msnid <- add_ascore(msnid, ascore)
vladpetyuk/PlexedPiper documentation built on June 24, 2021, 8:59 a.m.
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Description Usage Arguments Value Examples
Description
The function remaps the IDs in the FASTA file from RefSeq to Gene symbols. In case of multiple RefSeq sequences available, only the first longest is retained.
Usage
1 | best_PTM_location_by_ascore(msnid, ascore)
|
Arguments
msnid |
(MSnID object) MS/MS ID data |
ascore |
(data.frame) AScore results |
Value
(MSnID object) MS/MS ID data with added AScore
Examples
1 | msnid <- add_ascore(msnid, ascore)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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