read_study_design: Utilities for reading study design files.

Description Usage Arguments Examples

View source: R/read_study_design.R

Description

Fetches study design results from either local folder of DMS. Checks that study design files are internally consistent. DMS functionality not useful outside of PNNL unless connected through VPN.

* 'read_study_design()': returns a list of study design tables, accessible by $ * 'read_study_design_from_DMS()': finds data package folder in DMS and calls read_study_design there

Usage

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read_study_design(path_to_study_design)

Arguments

path_to_folder

(string) path to folder containing study design files

dataPkgNumber

(integer) data package number for DMS

Examples

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study_design <- read_study_design("data/study_design_folder")

fractions  <- study_design$fractions
samples    <- study_design$samples
references <- study_design$references


study_design <- read_study_design_from_DMS(3606)

fractions  <- study_design$fractions
samples    <- study_design$samples
references <- study_design$references

vladpetyuk/PlexedPiper documentation built on June 24, 2021, 8:59 a.m.