show_ggheatmap: Displays ggplot based heatmap composed of multiple ggplot...

In vlsci/ggplotheatmap: Compose complex heatmaps from multiple ggplots

Description

Displays ggplot based heatmap composed of multiple ggplot objects

Usage

show_ggheatmap(tile, row_dendro, col_dendro, lstrip = NULL, bstrip = NULL,
  cold.height = 0.2, rowd.width = 0.2, lstrip.width = 0.05,
  bstrip.height = 0.05, laxis.width = 0.2, baxis.height = 0.1,
  legend.height = 0.1)

Arguments

tile	ggplot object with a tiled grid of intensity values as produced by heatmap_components
row_dendro	row dendrogram as produced by heatmap_components
col_dendro	col dendromgram as produced by heatmap_components
lstrip	list containing ggplots to display as strips along left axis
bstrip	list containing ggplots to display as strips along bottom axis
cold.height	relative height of column dendro
rowd.width	relative width of row dendro
lstrip.width	relative width of lstrip plots
bstrip.height	relative height of bstrip plots
laxis.width	relative width of left axis
baxis.height	relative height of bottom axis
legend.height	relative height of legend

Value

a gtable object that can be displayed with grid.draw

Examples

data(pms)
hmc <- heatmap_components(x = pms)
show_ggheatmap(hmc$tile,row_dendro = hmc$rowd,col_dendro = hmc$cold)

vlsci/ggplotheatmap documentation built on May 3, 2019, 6:16 p.m.