| .standardFilter |
Source code
|
| RoarDataset |
Man page
Source code
|
| RoarDataset-class |
Man page
|
| RoarDatasetFromFiles |
Man page
Source code
|
| RoarDatasetMultipleAPA |
Man page
Source code
|
| RoarDatasetMultipleAPA-class |
Man page
|
| RoarDatasetMultipleAPAFromFiles |
Man page
Source code
|
| checkStep |
Man page
Source code
|
| combineFisherMethod |
Man page
Source code
|
| computePairedPvals |
Man page
|
| computePairedPvals, RoarDataset |
Man page
|
| computePairedPvals, RoarDatasetMultipleAPA |
Man page
|
| computePairedPvals,RoarDataset,numeric,numeric-method |
Man page
|
| computePairedPvals,RoarDatasetMultipleAPA,numeric,numeric-method |
Man page
|
| computePvals |
Man page
|
| computePvals, RoarDataset |
Man page
|
| computePvals, RoarDatasetMultipleAPA |
Man page
|
| computePvals,RoarDataset-method |
Man page
|
| computePvals,RoarDatasetMultipleAPA-method |
Man page
|
| computeRoars |
Man page
|
| computeRoars, RoarDataset, numeric, numeric |
Man page
|
| computeRoars, RoarDatasetMultipleAPA, numeric, numeric |
Man page
|
| computeRoars,RoarDataset-method |
Man page
|
| computeRoars,RoarDatasetMultipleAPA-method |
Man page
|
| cores |
Man page
|
| cores,RoarDataset-method |
Man page
|
| cores,RoarDatasetMultipleAPA-method |
Man page
|
| countPrePost |
Man page
|
| countPrePost,RoarDataset,logical |
Man page
|
| countPrePost,RoarDataset,logical-method |
Man page
|
| countPrePost,RoarDataset-method |
Man page
|
| countPrePost,RoarDatasetMultipleAPA |
Man page
|
| countPrePost,RoarDatasetMultipleAPA,logical-method |
Man page
|
| countPrePost,RoarDatasetMultipleAPA-method |
Man page
|
| countResults |
Man page
|
| countResults, RoarDataset |
Man page
|
| countResults, RoarDatasetMultipleAPA |
Man page
|
| countResults,RoarDataset-method |
Man page
|
| countResults,RoarDatasetMultipleAPA-method |
Man page
|
| createRoarMultipleBam |
Source code
|
| createRoarSingleBam |
Source code
|
| fpkmResults |
Man page
|
| fpkmResults, RoarDataset |
Man page
|
| fpkmResults, RoarDatasetMultipleAPA |
Man page
|
| fpkmResults,RoarDataset-method |
Man page
|
| fpkmResults,RoarDatasetMultipleAPA-method |
Man page
|
| getApaGenesFractions |
Source code
|
| getApaGenesFractionsMinusStrand |
Source code
|
| getApaGenesFractionsPlusStrand |
Source code
|
| getFisher |
Man page
Source code
|
| getPreCoordsSE |
Source code
|
| meanAcrossAssays |
Man page
Source code
|
| obtainPrePost |
Source code
|
| pvalueCorrectFilter |
Man page
|
| pvalueCorrectFilter, RoarDataset |
Man page
|
| pvalueCorrectFilter, RoarDatasetMultipleAPA |
Man page
|
| pvalueCorrectFilter,RoarDataset,numeric,numeric,character-method |
Man page
|
| pvalueCorrectFilter,RoarDatasetMultipleAPA,numeric,numeric,chara |
Man page
|
| pvalueFilter |
Man page
|
| pvalueFilter, RoarDataset |
Man page
|
| pvalueFilter, RoarDatasetMultipleAPA |
Man page
|
| pvalueFilter,RoarDataset,numeric,numeric-method |
Man page
|
| pvalueFilter,RoarDatasetMultipleAPA,numeric,numeric-method |
Man page
|
| roar |
Man page
|
| roar-package |
Man page
|
| standardFilter |
Man page
|
| standardFilter, RoarDataset |
Man page
|
| standardFilter, RoarDatasetMultipleAPA |
Man page
|
| standardFilter,RoarDataset,numeric-method |
Man page
|
| standardFilter,RoarDatasetMultipleAPA,numeric-method |
Man page
|
| sumFragmentCounts |
Source code
|
| totalResults |
Man page
|
| totalResults, RoarDataset |
Man page
|
| totalResults, RoarDatasetMultipleAPA |
Man page
|
| totalResults,RoarDataset-method |
Man page
|
| totalResults,RoarDatasetMultipleAPA-method |
Man page
|
