.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENCE
LICENSE
NAMESPACE
R/cdsearchr.R
R/fastodf.R
R/list_files.R
R/msavisr.R
R/pdomvisr.R
R/seqvisr-package.R
README.Rmd
README.html
README.md
docs/404.html
docs/LICENSE-text.html
docs/articles/index.html
docs/articles/seqvisr.html
docs/articles/seqvisr_files/figure-html/annotdat_all-1.png
docs/articles/seqvisr_files/figure-html/cbfcols-1.png
docs/articles/seqvisr_files/figure-html/cdsearchr_sample_output.png
docs/articles/seqvisr_files/figure-html/color_demo-1.png
docs/articles/seqvisr_files/figure-html/dim_ctrl-1.png
docs/articles/seqvisr_files/figure-html/feat_heights_colors-1.png
docs/articles/seqvisr_files/figure-html/featcols-1.png
docs/articles/seqvisr_files/figure-html/featureless_seq_plotted-1.png
docs/articles/seqvisr_files/figure-html/featureless_w_others-1.png
docs/articles/seqvisr_files/figure-html/label_off-1.png
docs/articles/seqvisr_files/figure-html/label_repel-1.png
docs/articles/seqvisr_files/figure-html/label_small-1.png
docs/articles/seqvisr_files/figure-html/msavisr_examples-1.png
docs/articles/seqvisr_files/figure-html/offset_disable-1.png
docs/articles/seqvisr_files/figure-html/offset_example-1.png
docs/articles/seqvisr_files/figure-html/overlap_annots-1.png
docs/articles/seqvisr_files/figure-html/pdomvisr-1.png
docs/articles/seqvisr_files/figure-html/roi1-1.png
docs/articles/seqvisr_files/figure-html/roi_list-1.png
docs/articles/seqvisr_files/header-attrs-2.10/header-attrs.js
docs/articles/seqvisr_files/header-attrs-2.9/header-attrs.js
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Rplot001.png
docs/reference/cdscheck.html
docs/reference/cdsearchr.html
docs/reference/cdsrestodf.html
docs/reference/cdsretrieve.html
docs/reference/cdssubmit.html
docs/reference/fasdirdf.html
docs/reference/fastodf.html
docs/reference/index.html
docs/reference/list_files.html
docs/reference/msavisr.html
docs/reference/pdomvisr.html
docs/reference/seqvisr-package.html
docs/reference/tsvtogginp.html
docs/reference/tsvtogginp_multi.html
docs/sitemap.xml
inst/extdata/cdsearchr_testdata.fasta
inst/extdata/drosophila_clocks_cds_aln.fasta
inst/extdata/fasdirdf_testdata.fasta
inst/extdata/google.fasta
inst/extdata/pdomvisr_testdata.csv
inst/extdata/pdomvisr_testdata.tsv
inst/extdata/testaln_mrna.fasta
man/cdscheck.Rd
man/cdsearchr.Rd
man/cdsrestodf.Rd
man/cdsretrieve.Rd
man/cdssubmit.Rd
man/fasdirdf.Rd
man/fastodf.Rd
man/list_files.Rd
man/msavisr.Rd
man/pdomvisr.Rd
man/seqvisr-package.Rd
man/tsvtogginp.Rd
man/tsvtogginp_multi.Rd
seqvisr.Rproj
vignettes/seqvisr.Rmd