CutDendroComp: Cut a dendrogram into a predefined number of groups

In vtorda/CompareTools: Post processing of COMPARE analysis

Description

Cut a dendrogram into a predefined number of groups

Usage

CutDendroComp(dendro, n_groups = NULL, height = NULL, plot = FALSE,
  min_num = NULL, rect_opt, ...)

Arguments

dendro	an object of class hclust
n_groups	The dataset that you want to depict. It can be a single character or a numeric value refers to the element of the compare object.
plot	Logical. If FALSE you have to define the group_n argumentum and a dataframe is returned with cluster names and groups a according hierachical clustering. This dataframe can be inputed to the GoupComp function. Otherwise you can plot a dendrogram with our withour a heatmap
min_num	Integer. Minimum size of a group.
rect_opt	argument passed to the rect.hclust function as a list
...	arguments passed to the plot function

Value

this function returns a compare object retain only just part of the original clusters

vtorda/CompareTools documentation built on Nov. 6, 2019, 9:07 p.m.