Man pages for wStockhausen/rPacificCod
Functions related to the Pacific cod IBM
| calcDWatAgeAtConstantTemp | Calculate time series of dry weight (DW)-at-age for a... |
| calcSLatAgeAtConstantTemp | Calculate SL-at-age for a constant temperature. |
| egg_CalcHatchSuccess | Calculate the hatch success of Pacific cod eggs by... |
| egg_GrowthRateDW | Calculate the temperature-dependent growth rate (DW) for... |
| egg_GrowthRateSL | Calculate the temperature-dependent growth rate (SL) for... |
| egg_PlotHatchSuccess | Plot the hatch success of Pacific cod eggs by temtperature |
| egg_StageDuration | Calculate the temperature-dependent duration of the Pacific... |
| getLifeStageInfo | Get a list that defines life stage info for the DisMELS... |
| gg_MapGrowthRate | Create a 'ggplot2'-style map of growth rates |
| growthRates_CompareAllStages | Plot growth rates as functions of temperature for all life... |
| growthRates_CompareJuveniles | Compare growth rates as functions of temperature for benthic... |
| integrateGrowthDW | Integrate SL based on a temperature time series |
| integrateGrowthSL | Integrate SL based on a temperature time series |
| juvBioenergetics_CompareRelationships | Plot the bioenergetic relationships for juvenile Pacific cod |
| juvBioenergetics_PlotRelationships | Plot the bioenergetic relationships for juvenile Pacific cod |
| juv_BioEnGrowth | Calculate growth (J/g fish/d) by weight and temperature |
| juv_Ca | Calculate the allometric component of consumption |
| juv_CT | Calculate consumed energy (J/g fish/day) of a (nominal) 6.8 g... |
| juveniles_GrowthRateTL | Calculate growth rate (mm/day TL) for juvenile larvae |
| juveniles_GrowthRateWW | Calculate growth rate (1/day wet weight) for juvenile larvae |
| juv_fC | Calculate the quadratic functional response to temperature in... |
| juv_fR | Calculate the quadratic functional response to temperature in... |
| juv_GT | Calculate observed growth (J/g fish/day) of a (nominally) 6.8... |
| juv_MT | Calculate functional reponse of respiration to temperature |
| juv_Ra | Calculate the allometric component of the respiration... |
| postflexionLarvae_GrowthRateDW | Calculate growth rate (1/day dry weight) for postflexion... |
| postflexionLarvae_GrowthRateSL | Calculate growth rate (mm/day SL) for postflexion larvae |
| postflexionLarvae_GrowthRateTL | Calculate growth rate (mm/day TL) for postflexion larvae |
| postflexionLarvae_GrowthRateWW | Calculate growth rate (1/day wet weight) for postflexion... |
| preflexionLarvae_GrowthRateDW | Calculate growth rate (1/day dry weight) for preflexion... |
| preflexionLarvae_GrowthRateSL | Calculate growth rate (mm/day SL) for preflexion larvae |
| sf_CalcTdepGrowthRatesFromROMS | Get a pkgsf dataframe with spatially-explicit... |
| stdgGrowthRateDW_EggStages | Calculate STDG growth rates (1/day wet weight) for egg stages |
| stdgGrowthRateDW_NonEggStages | Calculate STDG growth rates (1/day wet weight) for post-egg... |
| stdgGrowthRateSL_EggStages | Calculate STDG growth rates (mm/day SL) for egg stages |
| stdgGrowthRateSL_NonEggStages | Calculate STDG growth rates (mm/day SL) for non-egg stages |
| tmap_MapGrowthRate | Create a 'tmap'-style map of growth rates |
| ysl_ConvertSLtoDW | Calculate dry weight (mg)) corresponding to standard length... |
| ysl_GrowthRateDW | Calculate growth rate (1/day dry weight) for yolk-sac larvae |
| ysl_GrowthRateSL | Calculate growth rate (mm/day SL) for yolk-sac larvae |
| ysl_PNR | Calculate the "point-of-no-return" for non-feeding yolk-sac... |
| ysl_SwimmingSpeed | Calculate the swimming speed of YSL-stage larvae |
| ysl_YolkSacAbsorption | Calculate time to yolk-sac absorption for yolk-sac larvae |
