wtsPlots: Functions for creating various types of plots

View source: R/plotCompsAsCircles.ByFactor.R

plotCompsAsCircles.ByFactor

R Documentation

Plot size/age comps as circles by levels of a factor in a dataframe

Description

Function to plot size/age comps as circles by levels of a factor in a dataframe.

Usage

plotCompsAsCircles.ByFactor(
  dfr = NULL,
  factor.name = NULL,
  factor.levels = NULL,
  zcol = "z",
  xcol = "year",
  ycol = "size",
  transform = TRUE,
  overplot = FALSE,
  maxRadius = 0.5,
  scale = NULL,
  xjit = 0,
  fg = c("black", "grey"),
  bg = c("blue", "green"),
  lty = c("solid", "dotted"),
  transparency = 0.5,
  plotCohorts = FALSE,
  units = "data units",
  main = NA,
  subtitle = "",
  xlims = NULL,
  ylims = NULL,
  xlab = "",
  ylab = "",
  xaxt = TRUE,
  yaxt = TRUE,
  debug = FALSE
)

Arguments

`dfr`	: dataframe with columns xcol, ycol, zcols
`factor.name`	:
`factor.levels`	:
`zcol`	: dfr column name with values to plot as circles
`xcol`	: dfr column name with x-axis positions
`ycol`	: dfr column name with y-axis positions
`transform`	: flag (T/F) to scale circle size by area rather than diameter
`overplot`	: flag to draw on an existing plot
`maxRadius`	: max radius for circles (axis?)
`scale`	: overall scale factor
`xjit`	: jitter applied to x-axis positions
`fg`	: foreground color for circles
`bg`	: background color for circles
`lty`	: line type for circles
`transparency`	: alpha (0-1) transparency for circles
`plotCohorts`	: flag (T/F) to plot cohorts
`units`	: text to display as units
`main`	: plot title
`subtitle`	: plot subtitle
`xlims`	: x-axis limits
`ylims`	: y-axis limits
`xlab`	: x-axis label
`ylab`	: y-axis label
`xaxt`	:
`yaxt`	: flag (T/F)
`debug`	: flag to print debugging info