In wallaceEcoMod/wallace: A Modular Platform for Reproducible Modeling of Species Niches and Distributions

```{asis, echo = {{occs_userOccs_knit}}, eval = {{occs_userOccs_knit}}, include = {{occs_userOccs_knit}}} User CSV path with occurrence data. If the CSV file is not in the current workspace, change to the correct file path (e.g. "/Users/darwin/Documents/occs/").

```r}}
# NOTE: provide the folder path of the .csv file
occs_path <- ""
occs_path <- file.path(occs_path, "{{userCSV_rmd}}")
# get a list of species occurrence data
userOccs_{{spAbr}} <- occs_userOccs(
  txtPath = occs_path, 
  txtName = "{{userCSV_rmd}}", 
  txtSep = "{{sepCSV_rmd}}", 
  txtDec = "{{decCSV_rmd}}")
occs_{{spAbr}} <- userOccs_{{spAbr}}${{sp}}$cleaned

wallaceEcoMod/wallace documentation built on March 24, 2024, 5:15 p.m.