snm_fix: Title Extract the normalizeed data by function "snm"....

In wangjiaxuan666/fixbatch: The goal of packages is fixing the batch effect in data

Title Extract the normalizeed data by function "snm". detailed description in which the function base on snm R packaegs(http://www.bioconductor.org/packages/release/bioc/html/snm.html), packaged into fixbatch. Citation within R, enter citation("snm")).

Description

Title Extract the normalizeed data by function "snm". detailed description in which the function base on snm R packaegs(http://www.bioconductor.org/packages/release/bioc/html/snm.html), packaged into fixbatch. Citation within R, enter citation("snm")).

Usage

snm_fix(...)

Arguments

...	see in "?snm_fix_all" on "fixbatch"

Value

a normalizeed data

Examples

#library(bladderbatch)
#library(fixbatch)
#data(bladderdata)
#pheno = pData(bladderEset)
#edata = exprs(bladderEset)
#re1 = snm_fix_all(data = edata, batch = pheno,bv = 4, av = 3, iv = 2)
#re = snm_fix(data = edata, batch = pheno,bv = 4, av = 3, iv = 2)

wangjiaxuan666/fixbatch documentation built on Jan. 25, 2024, 4:39 p.m.