Man pages for warrenmcg/sleuth-ALR
Compositional Approach to Sleuth Data Analysis

alr_transformationCalculate ALR
calculate_alrCalculate ALR
calculate_clrCalculate CLR
choose_denomChoose denominator
clr_transformationCentered Logratio Transformation
deseq_size_factorsGet DESeq2 Size Factors
find_iqlr_denomsFind IQLR Denominators
geomeanGeometric mean
get_denom_namesGet Denom Name(s)
get_lr_functionsGet Logratio Function
impute_zerosImpute Rounded Zeros
iqlr_transformationCalculate IQLR
make_lr_sleuth_objectMake Compositional Sleuth Object
norm_identityNorm Identity
process_extra_optsProcess extra options for main sleuth-ALR function
remove_essential_zerosRemove Essential Zeros
sleuth_alr_resultsReturn sleuth-ALR Results Table
warrenmcg/sleuth-ALR documentation built on May 29, 2019, 9:57 a.m.