Files in welch16/ChIPexoQual

ChIPexoQual

.Rbuildignore

.Rinstignore

.gitignore

DESCRIPTION

NAMESPACE

NEWS

R/AllClasses.R R/AllGenerics.R R/base_blacklist.R R/base_subsampling.R R/base_summaryPlots.R R/base_summaryStats.R R/data.R R/methods_ExoData.R README.md

data/blacklists.RData

data/exoExample.RData

docs/articles/biblio.bib

docs/articles/index.html

docs/articles/vignette.html

docs/articles/vignette_files/figure-html/ARC1-1.png

docs/articles/vignette_files/figure-html/ARC2-1.png

docs/articles/vignette_files/figure-html/param_dist-1.png

docs/articles/vignette_files/figure-html/strand1-1.png

docs/articles/vignette_files/figure-html/subsamplots-1.png

docs/authors.html

docs/index.html

docs/jquery.sticky-kit.min.js

docs/link.svg

docs/pkgdown.css

docs/pkgdown.js

docs/reference/ARCvURCplot-4.png

docs/reference/ARCvURCplot.html

docs/reference/ExoData.html

docs/reference/ExoDataSubsampling.html

docs/reference/FSRDistplot-2.png

docs/reference/FSRDistplot.html

docs/reference/MAplot-2.png

docs/reference/MAplot.html

docs/reference/beta1-methods.html

docs/reference/beta2-methods.html

docs/reference/calculateParamDist.html

docs/reference/exoExample.html

docs/reference/index.html

docs/reference/nreads-methods.html

docs/reference/paramDist-methods.html

docs/reference/paramDistBoxplot-2.png

docs/reference/paramDistBoxplot.html

docs/reference/regionCompplot-2.png

docs/reference/regionCompplot.html

inst/extdata/ce10-blacklist.bed.gz

inst/extdata/dm3-blacklist.bed.gz

inst/extdata/hg37-blacklist.bed.gz

inst/extdata/hg38-blacklist.bed.gz

inst/extdata/mm10-blacklist.bed.gz

inst/extdata/mm9-blacklist.bed.gz

inst/scripts/convertBlacklist2GRanges.R man/ARCvURCplot.Rd man/ExoData.Rd man/ExoDataBlacklist.Rd man/ExoDataSubsampling.Rd man/FSRDistplot.Rd man/MAplot.Rd man/beta1-methods.Rd man/beta2-methods.Rd man/blacklists.Rd man/calculateParamDist.Rd man/exoExample.Rd man/formatRegions.Rd man/nreads-methods.Rd man/paramDist-methods.Rd man/paramDistBoxplot.Rd man/regionCompplot.Rd tests/testthat.R tests/testthat/test_ExoDataBlacklists.R tests/testthat/tests_ExoData.R tests/testthat/tests_summary_plots.R

vignettes/biblio.bib

vignettes/vignette.Rmd

welch16/ChIPexoQual documentation built on May 4, 2019, 4:18 a.m.