wenbostar/PGA: An package for identification of novel peptides by customized database derived from RNA-Seq

This package provides functions for construction of customized protein databases based on RNA-Seq data with/without genome guided, database searching, post-processing and report generation. This kind of customized protein database includes both the reference database (such as Refseq or ENSEMBL) and the novel peptide sequences form RNA-Seq data.

Package details

AuthorShaohang Xu, Bo Wen
Bioconductor views ImmunoOncology MassSpectrometry Proteomics RNASeq ReportWriting Sequencing Software
MaintainerBo Wen <wenbostar@gmail.com>, Shaohang Xu <xsh.skye@gmail.com>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
wenbostar/PGA documentation built on March 24, 2022, 6:48 p.m.