plot_Tij: Visualizing Town Level Reproductive Numbers
In wenlab501/EpiTrans: R package for estimation of epidemic transmissibility in time and space
plot_Tij R Documentation
Visualizing Town Level Reproductive Numbers
Description
Plot regional transmission relationship map by transmission probablity matrix
Usage
plot_Tij(Tij, sf)
Arguments
Tij
Matrix of transmission probablity between regions
sf
Object of class 'sf'; polygons of region data
Examples
data("EpiTrans")
covid = GeoLocater(TimeDF = covid19,PointsDF = RndPts)
covid.R_adj=Rj(t = covid$date, x = covid$x, y = covid$y, GI.pdf = lpdf_GI(5.2,1.5), unit_coord = "meter")
Tij = ReduceMatrix(covid.R_adj$Pij,covid$region)
plot_Tij(Tij = Tij, sf = Taipei)
wenlab501/EpiTrans documentation built on July 8, 2022, 9:14 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| plot_Tij | R Documentation |
Visualizing Town Level Reproductive Numbers
Description
Plot regional transmission relationship map by transmission probablity matrix
Usage
plot_Tij(Tij, sf)
Arguments
Tij |
Matrix of transmission probablity between regions |
sf |
Object of class 'sf'; polygons of region data |
Examples
data("EpiTrans")
covid = GeoLocater(TimeDF = covid19,PointsDF = RndPts)
covid.R_adj=Rj(t = covid$date, x = covid$x, y = covid$y, GI.pdf = lpdf_GI(5.2,1.5), unit_coord = "meter")
Tij = ReduceMatrix(covid.R_adj$Pij,covid$region)
plot_Tij(Tij = Tij, sf = Taipei)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.