wfondrie/xCombR: Identifing crosslinked peptides with standard search engines.

The xComb strategy is a method to detect crosslinked peptides in shotgun proteomics data through the creation of a specialized fasta database. xcombr is a reimplementation of this strategy as an R package. xcombr creates linearized versions of crosslinked peptides that can be written to a fasta file. These can then be searched against using many traditional proteomics search engines.

Getting started

Package details

Maintainer
LicenseGPLv3
Version0.0.9000
URL http://github.com/wfondrie/xcombr
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("wfondrie/xCombR")
wfondrie/xCombR documentation built on Sept. 29, 2018, 4:21 a.m.