Man pages for whtns/varbintools
Sequence Based Copy Number Detection Using Variable Bin Lengths
| bin_median_filter | Bin Median filter |
| breakpoint_filter | Breakpoint Filtering |
| CNProcessingCentromeres | CN Processing Centromeres |
| CN_Seg_GC_filter_correctionRG | Title |
| combine.func | Combining two levels with given medians in a given samples |
| create_chr_bar | Create Chromosome Bar |
| filter_vb_file | Filter VB file |
| format_chr_for_plot | Format Chr for Plot |
| format_ggaes | Format ggaes |
| gene_anno | Gene Annotation |
| lowess.gc | LOWESS GC normalization |
| MergeLevels | Level Merging Function |
| pipe | Pipe operator |
| plot_bin | Plot Bin Reads |
| plot_loess_segments | Plot Loess |
| plot_merged_segments | Plot Merged Segments |
| pretty_ratio_plot | Make a pretty ratio plot |
| ratio_plot | Plot a Ratio Plot |
| render_varbin_dashboard | Render Varbin Dashboard |
| segment_varbin | Segment Varbin |
| varbin_complexheatmap | Varbin Complex Heatmap |
| varbin_consensus_complexheatmap | Varbin Consensus Complex Heatmap |
| varbin_heatmap | Heatmap in Varbin |
| varbin_heatmap.3 | Heatmap 3 |
| varbin_pheno | Run Phenograph on varbin data |
| varbin_umap | make umap of varbin data |
