wilkox/fqdecontamr: Remove contaminant reads from fastq files
Given a list of contaminant taxa identified by the decontam software, and taxonomic annotations provided by MetaPhlAn2, this package can remove the reads belonging to contaminant taxa from a fastq or set of fastqs.
Getting started
Browse package contents
Package details |
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| Maintainer | |
| License | MIT + file LICENSE |
| Version | 0.0.0.9006 |
| URL | https://github.com/wilkox/fqdecontamr |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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