align_reads | Align reads from a fastq file against a bowtie2 index |
decontaminate | Remove contaminant reads from a fastq file |
download_genome | Download a genome from RefSeq |
fqdecontamr-package | fqdecontamr: Remove contaminant reads from fastq files |
prepare_bowtie_index | Prepare a bowtie2 index |
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