API for willpearse/pez
Phylogenetics for the Environmental Sciences

Global functions
.Random.seed Man page
.aed Man page
.bed Man page
.colless Man page
.comdist Man page
.d Man page
.delta Man page
.dist.fd Man page
.eaed Man page
.eco.evo.clade.regression Man page
.eco.evo.regression Man page
.eco.null Man page
.eco.phy.regression Man page
.eed Man page
.eigen.sum Man page
.gamma Man page
.haed Man page
.hed Man page
.iac Man page
.innd Man page Man page
.kappa Man page
.lambda Man page
.metric.null Man page
.mipd Man page
.mntd Man page
.mpd Man page
.pae Man page
.pcd Man page
.pd Man page
.pe Man page
.phylo.entropy Man page
.phylosor Man page
.plot.regression Man page
.prepare.regression.output Man page
.pse Man page
.psr Man page
.psv Man page
.rao Man page
.removeErrors Man page
.scheiner Man page
.ses Man page
.ses.innd Man page
.ses.mipd Man page
.ses.mntd Man page
.ses.mpd Man page
.ses.vntd Man page
.ses.vpd Man page
.simpson.phylogenetic Man page
.sqrt.phy Man page
.summary.regression Man page
.taxon Man page
.unifrac Man page
.vntd Man page
.vpd Man page
ConDivSim Man page Source code
[.comparative.comm Man page
ac Source code
aed Source code
as.data.frame.comparative.comm Man page Source code
assemblage.phylogenies Man page Source code
bed Source code
bind.replace Man page Source code
cc.manip Man page
check.ext.dist Source code
colless Source code
comdist Source code
comm Man page Source code
comm.dist Man page Source code
comm.dist.comparative.comm Man page Source code
comm.dist.matrix Man page Source code
comm<- Man page
communityPGLMM Man page Source code
communityPGLMM.binary Man page Source code
communityPGLMM.binary.LRT Man page Source code
communityPGLMM.gaussian Man page Source code
communityPGLMM.matrix.structure Man page Source code
communityPGLMM.predicted.values Man page Source code
comparative.comm Man page Source code
congeneric.merge Man page Source code
d Source code
delta Source code
dist.fd Source code
dist.func.default Man page Source code
dist.xxx Man page
drop_tip Man page Source code
eaed Source code
eco.env.regression Man page Source code Source code
eco.null Source code
eco.phy.regression Man page Source code Source code
eco.scape Man page Source code
eco.trait.regression Man page Source code Source code
eco.xxx.regression Man page Man page
eco.xxx.regression.list Man page
edge2phylo Man page Source code
eed Source code
eigen.sum Source code
env Man page Source code
env.names Man page Source code
env<- Man page
fibre.plot Source code
find.unique.branch.length Source code
fingerprint.regression Man page Source code
funct.phylo.dist Man page Source code
funct.phylo.dist.comparative.comm Source code
gamma Source code
generic.metrics Man page Man page Man page Man page Source code
generic.null Man page Source code
haed Source code
hed Source code
invert.traits Man page
invert.tree Man page
kappa Source code
laja Man page
lambda Source code
make.polytomy Source code
metric.null Source code
mipd Source code
mntd Source code
mpd Source code
nnd Source code Source code
package-pez Man page
pae Source code
pcd Source code
pd Source code
pe Source code
pez Man page
pez-package Man page Man page
pez.dispersion Man page Source code
pez.dissimilarity Man page Source code
pez.divergence Man page Source code
pez.endemism Man page Source code
pez.evenness Man page Source code
pez.metrics Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page Man page
pez.regularity Man page Source code
pez.richness Man page Source code
pez.shape Man page Source code
pez.tucker Man page Man page Man page
pglmm Man page
phy Man page
phy.build Man page
phy.signal Man page Source code
phy<- Man page
phylo.dist Man page Source code
phylo.dist.comparative.comm Man page Source code
phylo.dist.phylo Man page Source code
phylo.entropy Source code
phylosor Source code
pianka.dist Man page Source code
pianka.dist.comparative.comm Man page Source code
pianka.dist.matrix Man page Source code
plot.communityPGLMM Man page Source code
plot.comparative.comm Man page Source code
plot.eco.xxx.regression Man page Source code
plot.eco.xxx.regression.list Man page Source code
plot.fingerprint.regression Man page Source code
plot.regression Source code
prepare.regression.output Source code
princompOne Man page Source code
print.communityPGLMM Source code
print.comparative.comm Man page Source code
print.eco.xxx.regression Man page Source code
print.eco.xxx.regression.list Man page Source code
print.fingerprint.regression Man page Source code
pse Source code
psr Source code
psv Source code
rao Source code
removeErrors Source code
river.env Man page
river.sites Man page
scape Man page Source code
scheiner Source code
ses Source code
ses.innd Source code
ses.mipd Source code
ses.mntd Source code
ses.mpd Source code
ses.vntd Source code
ses.vpd Source code
sim.bd.phy Man page Source code
sim.bd.tr.phy Man page Source code
sim.meta Man page
sim.meta.comm Man page Source code
sim.meta.phy.comm Man page Source code
sim.phy Man page
simpson.phylogenetic Source code
sites Man page Source code
sites<- Man page
species Man page Source code
species<- Man page
sqrt.phy Source code
summary.communityPGLMM Man page Source code
summary.eco.xxx.regression Man page Source code
summary.eco.xxx.regression.list Man page Source code
summary.fingerprint.regression Man page Source code
summary.phy.structure Man page
taxon Source code
trait.asm Man page Source code
trait.names Man page Source code
traitgram.cc Man page Source code
traits Man page Source code
traits.dist Man page Source code
traits.dist.comparative.comm Man page Source code
traits.dist.data.frame Man page Source code
traits.dist.default Man page Source code
traits<- Man page
tree Man page Source code
tree<- Man page
unifrac Source code
vntd Source code
vpd Source code
within.comparative.comm Man page Source code
willpearse/pez documentation built on Nov. 19, 2017, 6:30 p.m.