dot-embed_umap: Calculates non-linear embeddings of MMD distances calculated...
In wmacnair/SampleQC: Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data
.embed_umap R Documentation
Calculates non-linear embeddings of MMD distances calculated by
calc_pairwise_mmds
Description
Calculates non-linear embeddings of MMD distances calculated by
calc_pairwise_mmds
Usage
.embed_umap(mmd_mat, n_nhbrs)
Arguments
mmd_mat
MMD distances
n_nhbrs
How many neighbours for UMAP nearest neighbours graph
Value
matrix of embedding
wmacnair/SampleQC documentation built on Nov. 18, 2022, 5 p.m.
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| .embed_umap | R Documentation |
Calculates non-linear embeddings of MMD distances calculated by calc_pairwise_mmds
Description
Calculates non-linear embeddings of MMD distances calculated by calc_pairwise_mmds
Usage
.embed_umap(mmd_mat, n_nhbrs)
Arguments
mmd_mat |
MMD distances |
n_nhbrs |
How many neighbours for UMAP nearest neighbours graph |
Value
matrix of embedding
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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