KDNorm: Kyte and Doolittle Scaled Hydropathy Index

In wmm27/idpr: Profiling and Analyzing Intrinsically Disordered Proteins in R

Kyte and Doolittle Scaled Hydropathy Index

Description

A dataset containing a measure of hydropathy for each amino acid residue as reported by Kyte J. and Doolittle R.F. (1982). Values normalized from 0 to 1.
If you use these values, please cite the source article.

Usage

KDNorm

Format

a data frame with 20 rows, one for each standard amino acid, and 2 variables

V1

Amino acid residues as a single letter

V2

Scaled Hydropathy of a residue, measured 0-1

Source

Kyte, Jack, and Russell F. Doolittle. "A simple method for displaying the hydropathic character of a protein." Journal of molecular biology 157.1 (1982): 105-132. https://doi.org/10.1016/0022-2836(82)90515-0

See Also

Other scaled hydropathy functions: foldIndexR(), meanScaledHydropathy(), scaledHydropathyGlobal(), scaledHydropathyLocal()

wmm27/idpr documentation built on Jan. 12, 2023, 8:45 a.m.