Files in wolfemd/alphaSimHlpR
Functions added to AlphaSimR to simplify simulating breeding schemes

.Rbuildignore

.gitignore

AlphaSimHlpR.Rproj

DESCRIPTION

LICENSE

NAMESPACE

R/AnalysisFunctions.R R/InitializationFunctions.R R/OptimizeByLOESS.R R/ParetoFront.R R/PopulationImprovement.R R/ProductPipeline.R R/RunBreedingScheme.R R/SpecifyPipeline.R R/TidyingFunctions.R R/newFunctions.R R/newProductPipeline.R R/plotData.R R/utils-pipe.R

_config.yml

_pkgdown.yml

docs/404.html

docs/LICENSE-text.html

docs/articles/AlphaSimHlpR_Manual.html

docs/articles/AlphaSimHlpR_Manual_files/header-attrs-2.10/header-attrs.js

docs/articles/AlphaSimHlpR_Manual_files/header-attrs-2.11/header-attrs.js

docs/articles/TwoPartStrategy.png

docs/articles/Using_AlphaSimHlpR.html

docs/articles/Using_AlphaSimHlpR_files/figure-html/Calculate means-1.png

docs/articles/Using_AlphaSimHlpR_files/figure-html/Calculate means-2.png

docs/articles/Using_AlphaSimHlpR_files/figure-html/Calculate means-3.png

docs/articles/Using_AlphaSimHlpR_files/figure-html/Calculate means-4.png

docs/articles/Using_AlphaSimHlpR_files/header-attrs-2.10/header-attrs.js

docs/articles/index.html

docs/authors.html

docs/bootstrap-toc.css

docs/bootstrap-toc.js

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/link.svg

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/Rplot001.png

docs/reference/adjustEntriesToBudget.html

docs/reference/calcDerivedParms.html

docs/reference/calculateBudget.html

docs/reference/calculateChkReps.html

docs/reference/checkAddRemove.html

docs/reference/compound.html

docs/reference/dataframePhenoRec.html

docs/reference/elementWise.html

docs/reference/exposition.html

docs/reference/fillPipeline.html

docs/reference/framePhenoRec.html

docs/reference/gebvPhenoEval.html

docs/reference/genomicMateSelCrit.html

docs/reference/getParmsResponse.html

docs/reference/grmPhenoEval.html

docs/reference/idx1.html

docs/reference/iidPhenoEval.html

docs/reference/index.html

docs/reference/initFuncADChk.html

docs/reference/initFuncSimp.html

docs/reference/initializeScheme.html

docs/reference/insertRow.html

docs/reference/ip.html

docs/reference/lastCycStgOut.html

docs/reference/makeGRM.html

docs/reference/make_grm.html

docs/reference/mean_records.html

docs/reference/optContrib.html

docs/reference/optimizeByLOESS.html

docs/reference/parentSelCritBLUP.html

docs/reference/parentSelCritGEBV.html

docs/reference/phenoRecFromPop.html

docs/reference/pipe.html

docs/reference/plotRecords.html

docs/reference/popImprov1Cyc.html

docs/reference/popImprov2Cyc.html

docs/reference/popImprovByMateSel.html

docs/reference/popImprovByParentSel.html

docs/reference/prodPipeFncChk.html

docs/reference/productPipeline.html

docs/reference/productPipelinePostBurnIn.html

docs/reference/productSelCritBLUP.html

docs/reference/readControlFile.html

docs/reference/removeOldestCyc.html

docs/reference/repeatSim.html

docs/reference/returnNonDom.html

docs/reference/runBreedingScheme.html

docs/reference/runBreedingScheme_wBurnIn.html

docs/reference/runOneRep.html

docs/reference/sampleEntryNumbers.html

docs/reference/selCritGRM.html

docs/reference/selCritIID.html

docs/reference/specifyBSP.html

docs/reference/specifyCosts.html

docs/reference/specifyPipeline.html

docs/reference/specifyPopulation.html

docs/reference/stageOutputs.html

docs/reference/testDom.html

docs/reference/tidyrecords.html

docs/reference/tidysims.html

docs/reference/whereIsID.html

inst/ControlFile_Big.txt

inst/ControlFile_Small.txt

inst/CostsCtrlFile_Big.txt

inst/CostsCtrlFile_Small.txt

inst/PopulationCtrlFile_Big.txt

inst/PopulationCtrlFile_Small.txt

man/adjustEntriesToBudget.Rd man/calcDerivedParms.Rd man/calculateBudget.Rd man/calculateChkReps.Rd man/checkAddRemove.Rd man/compound.Rd man/dataframePhenoRec.Rd man/elementWise.Rd man/exposition.Rd man/fillPipeline.Rd man/framePhenoRec.Rd man/gebvPhenoEval.Rd man/genomicMateSelCrit.Rd man/getParmsResponse.Rd man/grmPhenoEval.Rd man/idx1.Rd man/iidPhenoEval.Rd man/initFuncADChk.Rd man/initFuncSimp.Rd man/initializeScheme.Rd man/insertRow.Rd man/ip.Rd man/lastCycStgOut.Rd man/makeGRM.Rd man/make_grm.Rd man/mean_records.Rd man/optContrib.Rd man/optimizeByLOESS.Rd man/parentSelCritBLUP.Rd man/parentSelCritGEBV.Rd man/phenoRecFromPop.Rd man/pipe.Rd man/plotRecords.Rd man/popImprov1Cyc.Rd man/popImprov2Cyc.Rd man/popImprovByMateSel.Rd man/popImprovByParentSel.Rd man/prodPipeFncChk.Rd man/productPipeline.Rd man/productPipelinePostBurnIn.Rd man/productSelCritBLUP.Rd man/readControlFile.Rd man/removeOldestCyc.Rd man/repeatSim.Rd man/returnNonDom.Rd man/runBreedingScheme.Rd man/runOneRep.Rd man/sampleEntryNumbers.Rd man/selCritGRM.Rd man/selCritIID.Rd man/specifyBSP.Rd man/specifyCosts.Rd man/specifyPipeline.Rd man/specifyPopulation.Rd man/stageOutputs.Rd man/testDom.Rd man/tidyrecords.Rd man/tidysims.Rd man/whereIsID.Rd vignettes/AlphaSimHlpR_Manual.Rmd

vignettes/TwoPartStrategy.png

vignettes/Using_AlphaSimHlpR.Rmd

wolfemd/alphaSimHlpR documentation built on Sept. 19, 2021, 6:25 p.m.

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wolfemd/alphaSimHlpR
Functions added to AlphaSimR to simplify simulating breeding schemes

Files in wolfemd/alphaSimHlpR
Functions added to AlphaSimR to simplify simulating breeding schemes

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wolfemd/alphaSimHlpR Functions added to AlphaSimR to simplify simulating breeding schemes

Files in wolfemd/alphaSimHlpR Functions added to AlphaSimR to simplify simulating breeding schemes

R Package Documentation

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wolfemd/alphaSimHlpR
Functions added to AlphaSimR to simplify simulating breeding schemes

Files in wolfemd/alphaSimHlpR
Functions added to AlphaSimR to simplify simulating breeding schemes