Load_CountMatrix: Load count matrix
In wsteenhu/FEAST: FEAST: fast expectation-maximization for microbial source tracking
Description
Load counts file - A tab-separated ASCII text file.
A matrix C of samples by taxa with the sources and sinks.
The row names are the unique sample ids. The column names are the unique taxa ids.
Cij is the read counts of taxa j in sample i each sample. Note that this order must be respected
Usage
1
Load_CountMatrix(CountMatrix_path)
Arguments
CountMatrix_path
A path to a tab-separated ASCII text counts file
wsteenhu/FEAST documentation built on Jan. 14, 2022, 6:06 a.m.
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Description
Load counts file - A tab-separated ASCII text file. A matrix C of samples by taxa with the sources and sinks. The row names are the unique sample ids. The column names are the unique taxa ids. Cij is the read counts of taxa j in sample i each sample. Note that this order must be respected
Usage
1 | Load_CountMatrix(CountMatrix_path)
|
Arguments
CountMatrix_path |
A path to a tab-separated ASCII text counts file |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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