prep_bar: Prepare data for barpot
In wsteenhu/microbiomer: Package Containing Utility-functions to Work with Microbiota-data
Description
Usage
Arguments
Value
Examples
Description
Prepare data for barpot
Usage
1
Arguments
ps
phyloseq-object
n
number of OTUs/ASVs to include
residuals
include residuals (logical). Default: TRUE
Value
returns a data.frame in long-format with a column 'OTU' (containing formatted names of each OTU)
and 'value' containing either raw read counts or relative abundances (depending on what type of phyloseq
was initially loaded).
Examples
1
2
wsteenhu/microbiomer documentation built on March 11, 2021, 6:05 p.m.
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Description Usage Arguments Value Examples
Description
Prepare data for barpot
Usage
1 |
Arguments
ps |
phyloseq-object |
n |
number of OTUs/ASVs to include |
residuals |
include residuals (logical). Default: TRUE |
Value
returns a data.frame in long-format with a column 'OTU' (containing formatted names of each OTU) and 'value' containing either raw read counts or relative abundances (depending on what type of phyloseq was initially loaded).
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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