rpep: Get random peptides from protein sequences
In wt12318/Easy_Bioinfo: Make some common bioinformatic workfolw easier to operate
rpep R Documentation
Get random peptides from protein sequences
Description
Get random peptides from protein sequences
Usage
rpep(dt, mer_len, random_num, pepseq_col, id_col)
Arguments
dt
A dataframe with at least 1 column containg protein sequence
mer_len
An integer number, the length of random peptide
random_num
An integer number, the number of random peptides needed
Value
A dataframe with a column named random_pep, containg the random peptides of sepecific length extracted from given proteins.
Examples
res <- rpep(uniprot_protein_test,mer_len=9,random_num=100)
wt12318/Easy_Bioinfo documentation built on June 17, 2022, 9:22 a.m.
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| rpep | R Documentation |
Get random peptides from protein sequences
Description
Get random peptides from protein sequences
Usage
rpep(dt, mer_len, random_num, pepseq_col, id_col)
Arguments
dt |
A dataframe with at least 1 column containg protein sequence |
mer_len |
An integer number, the length of random peptide |
random_num |
An integer number, the number of random peptides needed |
Value
A dataframe with a column named random_pep, containg the random peptides of sepecific length extracted from given proteins.
Examples
res <- rpep(uniprot_protein_test,mer_len=9,random_num=100)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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