Collection of Rudimentary Bioinformatics Tools

best_subnets | The best subnetworks |

column | Extract a column from a matrix |

Corbi-package | Corbi - Collection of Rudimentary Bioinformatics Tools |

extend_subnets | Extend subnetworks from smaller subnetworks |

get_shortest_distances | Calculate shortest distances of unweighted network |

get_subnets | All subnetworks of limited size |

kappa_score | Cohen's kappa score |

markrank | MarkRank |

net_align | Network alignment method based on conditional random fields |

net_query | Network querying method based on conditional random fields |

nnzero | The number of non-zero values of a submatrix |

read_net | Read network information from text file |

rmultihyper | The Multivariate Hypergeometric Distribution |

submatrix | Extract a submatrix from a matrix |

write_net | Write network information to text file |

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