netDEG_pvalue | R Documentation |
Perform the single or two side tests and calculate the p-values.
netDEG_pvalue(ref.ratio.dist, expr.val, log.expr = FALSE, scale.degree = FALSE)
ref.ratio.dist |
The expression ratio distribution profile returned by |
expr.val |
Numeric vector of gene expression values in the sample. |
log.expr |
Logical variable indicating whether the input expression vector is in logarithmic scale. |
scale.degree |
Logical variable indicating whether the degree values are scaled according to the dropout rate. |
This function will return a list with the following components:
up |
A numeric vector containing the p-values of up-regulation test. |
down |
A numeric vector containing the p-values of down-regulation test. |
twoside |
A numeric vector containing the p-values of twoside test. |
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