sequence_mapper: The sequence mapper function (1) checks if there is already a...

sequence_mapperR Documentation

The sequence mapper function (1) checks if there is already a 'sequence_map.tsv'. (2) If it exists it will merged with the new sequences from the 'sequence_overview.tsv'. If not a new 'sequence_map.tsv' will be created. (3) Finally a shiny app is started to edit the sequence information manually. All "please edit" fields need to be filled out.

Description

The sequence mapper function (1) checks if there is already a 'sequence_map.tsv'. (2) If it exists it will merged with the new sequences from the 'sequence_overview.tsv'. If not a new 'sequence_map.tsv' will be created. (3) Finally a shiny app is started to edit the sequence information manually. All "please edit" fields need to be filled out.

Usage

sequence_mapper(
  sequence_overview_file = "sequence_overview_anon",
  output_name = "sequence_map"
)

Arguments

sequence_overview_file

The name of the file, which contains the sequence overview.

output_name

The name of the output file. In general named 'sequence_map.tsv'


wulms/bidsconvertr documentation built on Sept. 17, 2023, 11:22 p.m.