Description Usage Arguments Value Examples
View source: R/plot_functions.R
Generate a riverplot object that displays the similarities between signatures at different factorization ranks
1 | generateRiverplot(nmf.exp, edges.cutoff = 0, useH = FALSE, color = TRUE)
|
edges.cutoff |
cutoff until which similarities are displayed |
useH |
whether to relate signatures (FALSE) or exposures (TRUE) |
color |
whether to colorize the nodes based on PCA of the signatures |
ret riverplot object
1 2 | plt <- generateRiverplot(nmf.exp, edges.cutoff = 0.2)
plot(plt, plot_area = 1, yscale = 0.6, nodewidth = 0.5)
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