probPTreeGivenTTree: Calculate the probability of a phylogenetic tree given a...

Description Usage Arguments Value

View source: R/probPTreeGivenTTree.R

Description

Calculate the probability of a phylogenetic tree given a transmission tree

Usage

1
probPTreeGivenTTree(ctree, neg)

Arguments

ctree

Combined phylogenetic/transmission tree

neg

Within-host coalescent rate

Value

Probability of phylogeny given transmission tree


xavierdidelot/TransPhylo documentation built on Sept. 5, 2018, 5:36 p.m.