makeLinkCol: Generate binary column representing links between pairs,...

In xhtai/cartridges: Algorithm to Compare Cartridge Case Images

Description

Generate binary column representing links between pairs, given dendrogram and cut specification

Usage

makeLinkCol(allPairwise, pairColNums, htree, numClust, linkage)

Arguments

allPairwise	name of data frame containing all pairwise comparisons. This needs to have at least two columns, one representing the first item in the comparison, and one representing the second item.
pairColNums	vector of length 2 indicating the column numbers of 1. item 1 in comparison, 2. item 2 in comparison
htree	tree (dendrogram) after hierarchical clustering, returned by 'getHcluster'
numClust	number of desired clusters in clustering, can be a number from 1 to n, where n is the number of items to be clustered
linkage	one of "single", "complete", "average", "centroid", "minimax"

Value

binary vector representing whether links exist between pairs in 'allPairwise'

xhtai/cartridges documentation built on June 1, 2019, 2:58 p.m.