get_cov_obj: get_cov_obj
In xiaonui/vPan: An R package to analyze and visualize PAV results from pan-genome of "map-to-pan" strategy.
Description
Get an object of the COV class.
Usage
1
get_cov_obj(cov_data, phen_info = NULL, gene_info = NULL)
Arguments
cov_data
A numeric 'matrix' or 'data.frame' of the coverage data.
The row names are gene names. The column names are sample names.
phen_info
A 'data.frame' of phenotype data. The row names are sample name.
gene_info
A 'data.frame' of gene data. The row names are gene name.
The ‘cov_data' shouldn’t contain gene that is 0 in all sample, and the same for sample.
xiaonui/vPan documentation built on Dec. 23, 2021, 6:17 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
Get an object of the COV class.
Usage
1 | get_cov_obj(cov_data, phen_info = NULL, gene_info = NULL)
|
Arguments
cov_data |
A numeric 'matrix' or 'data.frame' of the coverage data. The row names are gene names. The column names are sample names. |
phen_info |
A 'data.frame' of phenotype data. The row names are sample name. |
gene_info |
A 'data.frame' of gene data. The row names are gene name. The ‘cov_data' shouldn’t contain gene that is 0 in all sample, and the same for sample. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.