Files in xiaowenchenjax/epihet
Determining Epigenetic Heterogeneity from Bisulfite Sequencing Data
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/RcppExports.R
R/compMatrix.R
R/data.R
R/diffHet.R
R/epiBox.R
R/epiMA.R
R/epiMap.R
R/epiPCA.R
R/epiTSNE.R
R/epihet.R
R/epinetwork.R
R/epipathway.R
R/makeGR.R
R/methClone.R
R/moduleanno.R
R/modulesim.R
R/modulevisual.R
R/readGR.R
R/shannon.R
R/splitn.R
R/summarize.R
R/userobj.R
README.md
data/DEG.rda
data/DEH.rda
data/background.rda
data/datTraits.rda
data/diffhetmatrix.rda
data/moduledm.rda
data/modulesil.rda
data/promoter.rda
data/sharedmatrix.rda
inst/extdata/D-2238/D-2238.chr22.region.bam
inst/extdata/D-2238/D-2238.chr22.region.bam.bai
inst/extdata/D-2668/D-2668.chr22.region.bam
inst/extdata/D-2668/D-2668.chr22.region.bam.bai
inst/extdata/N-1/N-1.chr22.region.bam
inst/extdata/N-1/N-1.chr22.region.bam.bai
inst/extdata/N-2/N-2.chr22.region.bam
inst/extdata/N-2/N-2.chr22.region.bam.bai
man/DEG.Rd
man/DEH.Rd
man/background.Rd
man/compMatrix.Rd
man/datTraits.Rd
man/diffHet.Rd
man/diffhetmatrix.Rd
man/epiBox.Rd
man/epiMA.Rd
man/epiMap.Rd
man/epiPCA.Rd
man/epiTSNE.Rd
man/epinetwork.Rd
man/epipathway.Rd
man/jaccard.Rd
man/makeGR.Rd
man/methClone.Rd
man/moduleanno.Rd
man/moduledm.Rd
man/modulesil.Rd
man/modulesim.Rd
man/modulevisual.Rd
man/promoter.Rd
man/readGR.Rd
man/shannon.Rd
man/sharedmatrix.Rd
man/splitn.Rd
man/summarize.Rd
man/userobj.Rd
vignettes/epihet.Rnw
